Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842647.1_cds_XP_016508430.1_21451
CDS Infomation

[gene=LOC107826012] [db_xref=GeneID:107826012] [protein=CDPK-related kinase 5-like] [protein_id=XP_016508430.1] [location=join(1384..1941,3086..3216,3459..3500,3615..3723,4117..4195,4331..4627,4710..4822,4945..5052,5136..5198,5295..5462,5615..5755)] [gbkey=CDS]
Sequence

ATGGGTGCTTGCACTTCAAAACCCTCTAATTTTTCCGGCGATAGCATTACCGTCGCCGGC
GACGTCGCTACACTTCCGGTGAAATCTGGTCCGAACAATGAAGACGATGTTAACAGCCAT
CAGACGAAAAAGGACGAACCTAATGTGGGTAAAAAGTCGCCATTTTTCCCCTTCTACAGT
CCAAGTCCGGCGCATTATTTATTCTCAAAGAAGTCTCCGGCTACGAATGCCAGCTCTAAT
TCTACTCCCATGAGGTTCTTTAAACGGCCGTTCCCTCCGCCTTCTCCGGCGAAGCACATC
CGTTCTCTGTTGGCTCGGCGACACGGCACGGTGAAACCCAACGAGTCTGCAATCCCCGAA
GGGAGTGAATCAGAGGTCGGAGGCGGAGGCGGCGCGGGGCTAGATAAGAGCTTTGGATTT
TCGAAGAATTTTGGGAACAAGTATGAGATGGGAGAGGAAGTAGGAAGAGGGCATTTTGGG
TATACTTGTAAAGCTAAGTTTAAGAAAGGTGAAGTCAAGGGACAAGAGGTTGCTGTAAAA
GTCATTCCCAAATCAAAGATGACTACTGCAATAGCCATTGAGGATGTGAGAAGGGAGGTG
AAGATATTAAGAGCTTTGACGGGACATAATAATTTAGTTAAGTTTTATGATGCATATGAA
GACCCCAACAATGTCTACATAGTCATGGAGCTATGTGAAGGAGGCGAGCTTTTGGATAGA
ATACTCTCTAGAGGTGGGAAGTACACAGAAGACGATGCAAAGTCTGTAATGATACAAATA
CTGAAAGTTGTTGCATTTTGCCATCTTCAAGGTGTGGTGCACCGGGATCTCAAACCAGAG
AACTTCTTATTCACGTCTAAGGATGAAAATGCACAACTTAAAGCAATAGACTTTGGATTG
TCTGATTTTGTGAAGCCAGATGAAAGACTTAATGATATTGTCGGTAGTGCATATTATGTA
GCGCCGGAGGTTCTACATAGATCTTACAGTACAGAGGCTGATGTGTGGAGTATAGGTGTA
ATAGCATATATCCTGTTGTGTGGAAGCCGTCCGTTTTGGGCTCGAACAGAATCTGGAATT
TTTAGAGCTGTCCTAAAAGCTGATCCAAGTTTTGACGAACAGCCTTGGCCTACATTATCT
TCTGAGGCAAAAGATTTTGTGAAACGTCTGTTGAATAAAGATCCCCGGAAAAGAATGACT
GCAGCTCAGGCTTTGGGTCACCCATGGATAAAGAATAGTCATAACATAGAGATGCCTTTG
GATATTTTGATATTCAAACTAATGAAGGCTTACATGAGGTCCTCTGCTCTTAGAAAAGCT
GCACTACGGGCTTTGTCAAAGACATTGACTGTAGATGAGCTATTTTATCTGAAGGAGCAG
TTTGCACTGCTGGAACCAAACAAAAATGGCACCATAAGTTTCGATAACGTTAAAACGGCC
CTGATGAAACATGCAACAGATGCTATGAAGGAAGCTCGTATGCATGATTTTCTTGCATCG
CTTAATGCACTGCAATACAGGAGGATGGATTTTGAGGAATTCTGTGCTGCTGCATTAAGT
GTTCATCAGCTTGAGGCTCTTGACCGATGGGAACAACATGCACGTTGTGCCTATGAAATT
TTTGAGAAGGAAGGCAATAGGGCTATTATGATAGAAGAATTAGCTTCGGAACTTGGTCTT
AGCCCTTCTGTTCCAGTCCATGCTGTTCTACATGACTGGCTTAGGCATACTGATGGAAAG
CTCAGTTTTCTTGGTTTTGCAAAGTTGTTGCATGGAGTGTCCAGCCGCTCAATTACAAAA
GTTCAATGA

Peptide Sequence

PEP ID

XP_016508430.1
PEP Infomation

PREDICTED: CDPK-related kinase 5-like [Nicotiana tabacum]
Sequence

MGACTSKPSNFSGDSITVAGDVATLPVKSGPNNEDDVNSHQTKKDEPNVGKKSPFFPFYS
PSPAHYLFSKKSPATNASSNSTPMRFFKRPFPPPSPAKHIRSLLARRHGTVKPNESAIPE
GSESEVGGGGGAGLDKSFGFSKNFGNKYEMGEEVGRGHFGYTCKAKFKKGEVKGQEVAVK
VIPKSKMTTAIAIEDVRREVKILRALTGHNNLVKFYDAYEDPNNVYIVMELCEGGELLDR
ILSRGGKYTEDDAKSVMIQILKVVAFCHLQGVVHRDLKPENFLFTSKDENAQLKAIDFGL
SDFVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGI
FRAVLKADPSFDEQPWPTLSSEAKDFVKRLLNKDPRKRMTAAQALGHPWIKNSHNIEMPL
DILIFKLMKAYMRSSALRKAALRALSKTLTVDELFYLKEQFALLEPNKNGTISFDNVKTA
LMKHATDAMKEARMHDFLASLNALQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYEI
FEKEGNRAIMIEELASELGLSPSVPVHAVLHDWLRHTDGKLSFLGFAKLLHGVSSRSITK
VQ

Transcript Sequence

Gene sequence data has not been registered.